Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787234.1_cds_XP_016441764.1_3
CDS Infomation

[gene=LOC107764536] [db_xref=GeneID:107764536] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016441764.1] [location=complement(join(4595..5457,5496..6084,6494..6565))] [gbkey=CDS]
Sequence

ATGGCACACACTATTGAGATTACCCCAATAAATTGTCGAACTCCACTGCTTCATCAAACT
ACGGAACATGAGATAGAAGAAGGGAGGAATGTGGATCAATTAATAGAGACAAATCAAATT
CTTGATGAAATATATTTAGATTTGTACCATTCATCTACCAAATCTTGTACCATATTCAAA
GTAAGTGTGGGGCTAAGTGAATCAAATCCAAATGCTTATAAGCCAATGTTGGTCTCTATT
GGTCCTTACCATAAGAAGAATTCACAACTACGCTCAATGGAGAATTATAAATTGCGTTAC
CTACAACGGTTTCTTAGGAGAAAAGTAGGGCTTGATGTGAAAACTTGCATTAGTGAATTG
GAGAAATTTAAGGATGAGGCACTAAAGTGTTATGATGATATAGAGGATATTTATAGTGAA
AACAATACTGGTCAATTTTTGAAAATGTTGTTGGTTGATGGTTGTTTTATAGTTGAGTTT
ATTCGAGAGCGCTGTGGAAGGAAGCCAACAGAAGAAGATATTATTATCCCCTACAGTTGC
ATAGATGGTCAAGTACATCGAGATTTGTTATTATTAGAAAACCAACTTCCTTTCTTTGTC
CTCACTAAGCTTCACAACATGACAATGGATCCAATCAGGGCGGATTTAGGGGGGCGGAAG
CTATCATTCATAAAATTGGTGAAAGAGACCTTTAATTCTTCCTTCTTGAAGATGAGTCCT
GCATCCATTCTTGAGATTGAAAGTGATGCCAAAAACATTAAACATTTACTTCAACTAGTA
CATATGTCATGTCACCCTTTGGAGAAGAAAACTAGTCTTACTCTTGAAAGCCCTGGTTTG
GAAATGGAACATTGCAGGAAAAGCTTATGTTGGAATCCTTTAGAAATGGTTAGATTGAAA
AATATGCCAAATGATAAGGACCACCAAACATGGGATGCTAACATGCCGAATGCAACAGAG
CTTCGCGAAGCTGGAGTTACATTTTCAAAAATTGGAAAAATCTATAGAAGATTGGAGGAA
GATCACGACCTTGGAGATAACACAAGTTTATTTGACATTAAATTTGAGAATGGAGTGATG
ACAATTCCTTGTTTTGAAGTCTTTGACTGTACAGAGACGATCCTGAGAAATCTTATAGCA
TACGAACAACAATCATCTGATGTACATCCTAGATATTTCAGTGATTTTTCCATTTTTATG
GATTATCTTATCGACTCGGACAAAGATGTGAGTTTGCTTCGCCAGAAAGGAATCATCAAG
AACGAGATAGGAGAGGACAAAAGAGTGGCTAGCCTTTTTAACAAAATTGGGGAAGGGGTT
GCCATTTCTTATGACTTCTATTACAAACAAGAATACTTGATGTTAGTTCAACATTGTGAA
AAACCATGGAACCGAATGAAGGCAAGTTTGAGGCACAATTATTTTAACAGTCCTTGGGCG
GGAGCTTCAACTGTGGGAGCCGTCATACTCCTCATACTCACAGCTATACAGACCGTTCTA
GCTTTCACAGGTGGTGTTAAGTAG

Peptide Sequence

PEP ID

XP_016441764.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MAHTIEITPINCRTPLLHQTTEHEIEEGRNVDQLIETNQILDEIYLDLYHSSTKSCTIFK
VSVGLSESNPNAYKPMLVSIGPYHKKNSQLRSMENYKLRYLQRFLRRKVGLDVKTCISEL
EKFKDEALKCYDDIEDIYSENNTGQFLKMLLVDGCFIVEFIRERCGRKPTEEDIIIPYSC
IDGQVHRDLLLLENQLPFFVLTKLHNMTMDPIRADLGGRKLSFIKLVKETFNSSFLKMSP
ASILEIESDAKNIKHLLQLVHMSCHPLEKKTSLTLESPGLEMEHCRKSLCWNPLEMVRLK
NMPNDKDHQTWDANMPNATELREAGVTFSKIGKIYRRLEEDHDLGDNTSLFDIKFENGVM
TIPCFEVFDCTETILRNLIAYEQQSSDVHPRYFSDFSIFMDYLIDSDKDVSLLRQKGIIK
NEIGEDKRVASLFNKIGEGVAISYDFYYKQEYLMLVQHCEKPWNRMKASLRHNYFNSPWA
GASTVGAVILLILTAIQTVLAFTGGVK

Transcript Sequence

Gene sequence data has not been registered.